Contributions

2013

Identification of genetic variation on the horse y chromosome and the tracing of male founder lineages in modern breeds. Wallner et al., PLoS One 2013, Apr., [VetMed, Grem] 

The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems. Chylinski et al., RNA Biol. 2013, Apr., [MFPL, Charpentier]

CLP1 links tRNA metabolism to progressive motor-neuron loss. Hanada et al., Nature 2013, Mar., [IMBA, Martinez, Penninger]

Genome-Wide Quantitative Enhancer Activity Maps Identified by STARR-seq. Arnold et al., Science 2013, Mar., [IMP, Stark]

2012

A Histone Deacetylase Adjusts Transcription Kinetics at Coding Sequences during Candida albicans Morphogenesis. Hnisz et al., PLoS Genetics 2012 Dec., [MFPL, Kuchler]

 Transcriptional silencing of transposons by piwi and maelstrom and its impact on chromatin state and gene expression. Sienski et al., Cell 2012 Nov., [IMBA, Brennecke] 

An Unusual Case of Apparent Hypermutation in Arabidopsis thaliana. Sasaki et al., Genetics. 2012 Sep., [GMI Matzke]

The Cochaperone Shutdown Defines a Group of Biogenesis Factors Essential for All piRNA Populations in Drosophila. Olivieri et al., Mol Cell. 2012 Aug., [IMBA, Brennecke] 

FACS Purification and Transcriptome Analysis of Drosophila Neural Stem Cells Reveals a Role for Klumpfuss in Self-Renewal. Berger et al., Cell Rep. 2012 Aug., [IMBA Knoblich]

Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena. Genes Dev. 2012 Aug., [IMBA, Mochizuki]

Chromosome end protection by blunt-ended telomeres. Kazda et al., Genes Dev. 2012 Aug., [GMI, Riha]

Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis. Dinh et al., PLoS One. 2012 July, [GMI/MFPL, Mittelsten-Scheid/von Haeseler]

The B-cell identity factor Pax5 regulates distinct transcriptional programmes in early and late B lymphopoiesis. Revilla-I-Domingo et al., EMBO J. 2012 June, [IMP, Busslinger]

Essential role of EBF1 in the generation and function of distinct mature B cell types. Vilagos et al, J Exp Med 2012 Apr., [IMP, Busslinger]

Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis. Marquez et al., Genome Res. 2012 Mar., [MFPL, Barta]

Adenosine deaminases that act on RNA induce reproducible changes in abundance and sequence of embryonic miRNAs. Vesely et al., Genome Res. 2012 Aug [MFPL, Jantsch]

2011

Forward and Reverse Genetics through Derivation of Haploid Mouse Embryonic Stem Cells. Elling et al., Cell Stem Cell 2011 Dec.,  [IMBA, Penninger]

A computational pipeline for comparative ChIP-seq analyses. Bardet et al., Nat. Protoc. 2011 Dec. [IMP, Stark]

An RNA-Seq Strategy to Detect the Complete Coding and Non-Coding Transcriptome Including Full-Length Imprinted Macro ncRNAs. Pauler et al, PLoS One 2011Nov, [CEMM, Barlow, GenAU consortium]

Genetic Rearrangements Can Modify Chromatin Features at Epialleles. Foerster et al, Plos Genetics 2011 Oct., [GMI, Mittelsten Scheid]

AGO6 functions in RNA-mediated transcriptional gene silencing in shoot and root meristems in Arabidopsis thaliana. Eun et al, Plos One 2011 Oct., [GMI, Matzke]

The tumour suppressor L(3)mbt inhibits neuroepithelial proliferation and acts on insulator elements. Richter et al., Nat Cell Biol. 2011 Aug., [IMBA, Knoblich] 

A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors. Handler et al., EMBO J. 2011 Aug, [IMBA, Brennecke]

High-resolution analysis of parent-of-origin allelic expression in the Arabidopsis Endosperm. Wolff et al., Plos Genetics 2011 Jun., [GMI, Nordborg]

The transcription factor Pax5 regulates its target genes by recruiting chromatin-modifying proteins in committed B cells. McManus et al., EMBO J. 2011 May, [IMP, Busslinger]